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Bioinformatics Advance Access originally published online on November 22, 2007
Bioinformatics 2008 24(2):279-281; doi:10.1093/bioinformatics/btm577
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© The Author 2007. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

PedVizApi: a Java API for the interactive, visual analysis of extended pedigrees

Christian Fuchsberger 1,*, Mario Falchi 2, Lukas Forer 1 and Peter P. Pramstaller 1

1Institute of Genetic Medicine, European Academy, Bolzano, Italy and 2Twin Research & Genetic Epidemiology Unit, Kings College London, London, UK

*To whom correspondence should be addressed.


  Abstract

Summary: PedVizApi is a Java API (application program interface) for the visual analysis of large and complex pedigrees. It provides all the necessary functionality for the interactive exploration of extended genealogies. While available packages are mostly focused on a static representation or cannot be added to an existing application, PedVizApi is a highly flexible open source library for the efficient construction of visual-based applications for the analysis of family data. An extensive demo application and a R interface is provided.

Availability: http://www.pedvizapi.org

Contact: christian.fuchsberger{at}eurac.edu

Associate Editor: Keith Crandall

Received on September 11, 2007; revised on November 1, 2007; accepted on November 17, 2007

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