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Bioinformatics Advance Access originally published online on January 9, 2008
Bioinformatics 2008 24(4):586-587; doi:10.1093/bioinformatics/btn014
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© The Author 2008. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

The ModFOLD server for the quality assessment of protein structural models

Liam J. McGuffin

School of Biological Sciences, University of Reading, Whiteknights, Reading RG6 6AS, UK


  Abstract

Summary: The reliable assessment of the quality of protein structural models is fundamental to the progress of structural bioinformatics. The ModFOLD server provides access to two accurate techniques for the global and local prediction of the quality of 3D models of proteins. Firstly ModFOLD, which is a fast Model Quality Assessment Program (MQAP) used for the global assessment of either single or multiple models. Secondly ModFOLDclust, which is a more intensive method that carries out clustering of multiple models and provides per-residue local quality assessment.

Availability: http://www.biocentre.rdg.ac.uk/bioinformatics/ModFOLD/

Contact: l.j.mcguffin{at}reading.ac.uk

Associate Editor: Anna Tramontano

Received on November 14, 2007; revised on January 7, 2008; accepted on January 7, 2008

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