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Bioinformatics Advance Access published online on July 9, 2004
Bioinformatics, doi:10.1093/bioinformatics/bth400
Bioinformatics © Oxford University Press 2004; all rights reserved
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Received January 23, 2004
Revised June 15, 2004
Accepted July 1, 2004

Applications note

VisRD - Visual recombination detection

Kristoffer Forslund 1*, Daniel H. Huson 2, Vincent Moulton 1

1 The Linnaeus Centre for Bioinformatics, BMC, Box 598, Uppsala, 751 24, Sweden
2 Center for Bioinformatics Tübingen (ZBIT), Sand 14, Tübingen, 72076, Germany

* To whom correspondence should be addressed. E-mail: krfo6395{at}student.uu.se.


  Abstract

Summary: VisRD, a program for visual recombination detection in a sequence alignment is presented. VisRD is written in Java and is designed to compliment the multi-purpose phylogenetic software package SplitsTree4.

Availability: The software is freely available from http://www.lcb.uu.se/~vmoulton/software/visrd/


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