Bioinformatics Advance Access published online on August 5, 2004
Bioinformatics, doi:10.1093/bioinformatics/bth457
Bioinformatics © Oxford University Press 2004; all rights reserved
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1 Whitehead Institute for Biomedical Research, Cambridge, MA 02142
* To whom correspondence should be addressed. E-mail: jcbarret{at}broad.mit.edu.
Abstract: Research over the last few years has revealed significant haplotype structure in the human genome. The characterization of these patterns, particularly in the context of medical genetic association studies, is becoming a routine research activity. Haploview is a software package that provides computation of linkage disequilibrium statistics and population haplotype patterns from primary genotype data in a visually appealing and interactive interface. Summary: A program for visualizing and analyzing LD and haplotype patterns in genotype data. Availability: http://www.broad.mit.edu/personal/jcbarret/haploview/.
Accepted July 23, 2004
Applications note
Haploview: analysis and visualization of LD and haplotype maps
2 MIT Media Lab, Cambridge, MA 02139
3 Whitehead Institute for Biomedical Research, Cambridge, MA 02142; Broad Institute of Harvard and MIT, Cambridge, MA
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