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Bioinformatics Advance Access published online on September 3, 2004
Bioinformatics, doi:10.1093/bioinformatics/bth494
Bioinformatics © Oxford University Press 2004; all rights reserved
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Received August 4, 2003
Revised June 15, 2004
Accepted August 18, 2004

Applications note

ProViz: Protein Interaction Visualization and Exploration

Florian Iragne 1, Macha Nikolski 1, Bertrand Mathieu 1, David Auber 1, and David Sherman 1*

1 LaBRI UMR 5800, Université Bordeaux 1, 351 cours de la Libération, 33405 Talence Cedex, France

* To whom correspondence should be addressed. E-mail: david.sherman{at}labri.fr.


  Abstract

Summary: ProViz is a tool for the visualization of Protein-Protein Interaction Networks, developed by the IntAct european project. It provides facilities for navigating in large graphs and exploring biologically-relevant features, and adopts emerging standards such as GO and PSI-MI.

Availability: ProViz is available under the GPL and may be freely downloaded.1

1 Source code and binaries are available at http://cbi.labri.fr/eng/proviz.htm.


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