Skip Navigation



Bioinformatics Advance Access published online on October 5, 2004
Bioinformatics, doi:10.1093/bioinformatics/bti048
Bioinformatics © Oxford University Press 2004; all rights reserved
This Article
Right arrow Advance Access manuscript (PDF) Freely available
Right arrow All Versions of this Article:
21/4/548    most recent
bti048v1
Right arrow Comments: Submit a response
Right arrow Alert me when this article is cited
Right arrow Alert me when Comments are posted
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Kim, J.
Right arrow Articles by Kim, S.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Kim, J.
Right arrow Articles by Kim, S.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Received June 23, 2004
Revised September 1, 2004
Accepted September 21, 2004

Applications note

TFExplorer: integrated analysis database for predicted transcription regulatory elements

Jinsoo Kim 1, Jungmin Seo 1, Young Seek Lee 2, and Sangsoo Kim 1*

1 National Genome Information Center, KRIBB, Daejeon, Korea
2 Department of Molecular and Life Science, Hanyang University, Asan, Kyeonggi-do, Korea

* To whom correspondence should be addressed. E-mail: sskimb{at}kribb.re.kr.


  Abstract

Summary: TFExplorer is a web-based integrated database for predicted regulatory elements in human, mouse, and rat. It shows predicted binding sites of transcription factors in the promoter regions, along with their phylogenetic footprinting information. In addition, TFExplorer can search for genes that have a given sequence pattern in their promoter regions using the motif-searching method.

Availability: TFExplorer is freely available at http://mars.kribb.re.kr:8080/tfExplorer/.


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?




Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.