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Bioinformatics Advance Access published online on January 28, 2005
Bioinformatics, doi:10.1093/bioinformatics/bti250
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Bioinformatics © Oxford University Press 2005; all rights reserved.
Received January 14, 2004
Accepted February 23, 2004

Applications note

Dictymold - a Dictyostelium discoideum genome browser database

Marius Felder 1, Karol Szafranski 1, Rüdiger Lehmann 1, Ludwig Eichinger 2, Angelika A. Noegel 2, Matthias Platzer 1, and Gernot Glöckner 1*

1 IMB Jena, Department of Genome Analysis, Beutenbergstr. 11, 07745 Jena, Germany
2 Center for Biochemistry, Medical Faculty, University of Cologne, Joseph-Stelzmann-Str. 52, 50931 Köln, Germany

* To whom correspondence should be addressed.
Gernot Glöckner, E-mail: gernot{at}imb-jena.de


  Abstract

Summary: With the Dictyostelium Genome Project nearing completion, we initiated the construction of a data repository for all Dictyostelium discoideum genomic data. Up to now this database, called DictyMOLD (Dicty Map Of Linked Data), incorporates the recently completed D. discoideum chromosome 1 and 2 sequences together with related annotations. To visualise maps, sequences and annotations and to provide access for the scientific community a perl-based browser was developed.

Availability: The DictyMOLD database is freely accessible via http://genome.imb-jena.de/dictyostelium/.


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