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Bioinformatics Advance Access published online on April 7, 2005
Bioinformatics, doi:10.1093/bioinformatics/bti427
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© The Author (2005). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oupjournals.org
Received February 15, 2005
Accepted March 31, 2005

Applications note

NodMutDB: a database for genes and mutants involved in symbiosis

Chunhong Mao 1*, Jing Qiu 1, Chunxia Wang 1, Trevor C. Charles 2, and Bruno W. S. Sobral 1

1 Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA
2 Department of Biology, University of Waterloo, Waterloo, ON N2L 3G1, Canada

* To whom correspondence should be addressed.
Chunhong Mao, E-mail: cmao{at}vbi.vt.edu


  Abstract

Summary: Functional genomics research is producing large amounts of data on the functions of individual genes related to symbiosis. We have developed a relational database, NodMutDB (Nodulation Mutant Database), to provide a comprehensive resource for depositing, organizing and retrieving information on symbiosis related genes, mutants and published literature. NodMutDB brings together new studies and existing mutant-based literature to facilitate our understanding of how genes function in symbiotic processes in both Rhizobia and their host plants.

Availability: http://nodmutdb.vbi.vt.edu.

Supplementary information: Database schema and data curation model are available at http://nodmutdb.vbi.vt.edu.


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