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Bioinformatics Advance Access published online on October 4, 2005
Bioinformatics, doi:10.1093/bioinformatics/bti691
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© The Author (2005). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org
Received May 13, 2005
Revised September 19, 2005
Accepted September 23, 2005

Applications note

CREDO: a web-based tool for computational detection of conserved sequence motifs in noncoding sequences

Tobias Hindemitt 1 and Klaus F. X. Mayer 1*

1 MIPS/Institute for Bioinformatics, GSF Research Centre for Environment and Health, Ingolstaedter Landstr. 1, 85758 Neuherberg, Germany

* To whom correspondence should be addressed.
Klaus F. X. Mayer, E-mail: kmayer{at}gsf.de


  Abstract

Summary: CREDO is a user-friendly, web-based tool that integrates the analysis and results of different algorithms widely used for the computational detection of conserved sequence motifs in noncoding sequences. It enables the easy comparison of the individual results. CREDO offers intuitive interfaces for easy and rapid configuration of the applied algorithms, and convenient views on the results in graphical and tabular format.

Availability: http://mips.gsf.de/proj/regulomips/credo.htm.

Supplementary information: A detailed help file for CREDO is available at http://mips.gsf.de/proj/regulomips/help.htm. Further supplementary material is available at the journal's website.


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