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Bioinformatics Advance Access published online on November 3, 2005
Bioinformatics, doi:10.1093/bioinformatics/bti757
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Published by Oxford University Press 2005
Received July 28, 2005
Revised October 17, 2005
Accepted October 28, 2005

Applications note

PRODISTIN web site: a tool for the functional classification of proteins from interaction networks

Anaïs Baudot 1 {dagger}, David Martin 2 {dagger}, Pierre Mouren 1 {dagger}, François Chevenet 3, Alain Guénoche 4, Bernard Jacq 1, and Christine Brun 1*

1 LGPD/IBDM, UMR6545 CNRS, Parc Scientifique et Technologique de Luminy, Case 907, 13288 Marseille cedex 9, France
2 LGPD/IBDM, UMR6545 CNRS, Parc Scientifique et Technologique de Luminy, Case 907, 13288 Marseille cedex 9, France; Centre for Molecular Medicine and Therapeutics, University of British Columbia Vancouver, BC, Canada
3 GEMI, UMR IRD/CNRS9926, IRD - BP 64501, 911 Av. Agropolis, 34394 Montpellier cedex 5, France
4 Institut de Mathématiques de Luminy, UPR9016 CNRS, Parc Scientifique et Technologique de Luminy, Case 907, 13288 Marseille cedex 9, France

* To whom correspondence should be addressed.
Christine Brun, E-mail: brun{at}ibdm.univ-mrs.fr


  Abstract

Summary: The PRODISTIN Web Site is a web service allowing users to functionally classify genes/proteins from any type of interaction network. The resulting computation provides a classification tree in which 1) genes/proteins are clustered according to the identity of their interaction partners and 2) functional classes are delineated in the tree using the Biological Process Gene Ontology annotations.

Availabitily: The PRODISTIN Web Site is freely accessible at http://gin.univ-mrs.fr/webdistin.

{dagger} These authors contributed equally to this work
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