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Bioinformatics Advance Access published online on December 6, 2005
Bioinformatics, doi:10.1093/bioinformatics/bti817
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© The Author (2005). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org
Received September 8, 2005
Revised November 16, 2005
Accepted December 2, 2005

Applications note

Clusterv: a tool for assessing the reliability of clusters discovered in DNA microarray data

Giorgio Valentini 1 *

1 DSI, Dipartimento di Scienze dell'Informazione, Università degli Studi di Milano, Via Comelico 39, Italy

* To whom correspondence should be addressed.
Giorgio Valentini, E-mail: valentini{at}dsi.unimi.it


  Abstract

Summary: We present a new R package for the assessment of the reliability of clusters discovered in high dimensional DNA microarray data. The package implements methods based on random projections that approximately preserve distances between examples in the projected subspaces.

Availability: http://homes.dsi.unimi.it/~valenti/SW/clusterv/download/clusterv_1.0.tar.gz.

Supplementary Information: http://homes.dsi.unimi.it/~valenti/SW/clusterv.


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