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Bioinformatics Advance Access published online on January 10, 2006
Bioinformatics, doi:10.1093/bioinformatics/btk037
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© The Author (2006). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org
Received November 14, 2005
Revised January 2, 2006
Accepted January 2, 2006

Applications note

BioShell - a package of tools for structural biology computations

Dominik Gront 1 * and Andrzej Kolinski 1

1 Faculty of Chemistry, Warsaw University, Pasteura 1, 02-093 Warsaw, Poland

* To whom correspondence should be addressed.
Dominik Gront, E-mail: dgront{at}chem.uw.edu.pl


  Abstract

Summary: BioShell is a suite of programs performing common tasks accompanying protein structure modeling. BioShell design is based on UNIX shell flexibility and should be used as its extension. Using BioShell various molecular modeling procedures can be integrated in a single pipeline.

Availability: BioShell package can be downloaded from its website: http://biocomp.chem.uw.edu.pl/BioShell. These pages provide many examples and a detailed documentation for the newest version.

Associate Editor: Keith A Crandall
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