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Bioinformatics Advance Access published online on February 18, 2007
Bioinformatics, doi:10.1093/bioinformatics/btm058
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© The Author (2007). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

A new JAVA interface implementation of THESIAS: Testing Haplotype EffectS In Association Studies

DA Tregouet * and V Garelle

INSERM, UMR S 525, and Université Pierre et Marie Curie-Paris6, UMR S 525; Paris, France

*To whom correspondence should be addressed. Dr. David-Alexandre Tregouet, E-mail: david.tregouet{at}chups.jussieu.fr


  Abstract

Summary: THESIAS is a popular software for carrying haplotype association analysis in unrelated individuals. In addition to the command line interface, a graphical JAVA interface is now proposed allowing one to run THESIAS in an user-friendly manner. Besides, new functionalities have been added to THESIAS including the possibility to analyse polychotomous phenotype and X-linked polymorphisms.

Availability: The software package including documentation and example data files is freely available at http://genecanvas.ecgene.net/. The source codes are also available upon request.

Associate Editor: Martin Bishop

Received on December 26, 2006; revised on February 9, 2007; accepted on February 9, 2007

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