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Bioinformatics Advance Access published online on May 7, 2007

Bioinformatics, doi:10.1093/bioinformatics/btm238
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© The Author (2007). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

CRCView: A web server for analyzing and visualizing microarray gene expression data using model-based clustering

Zuoshuang Xiang 1, Zhaohui Qin 2,3 and Yongqun He 1,3,4,*

1Unit for Laboratory Animal Medicine, University of Michigan, Ann Arbor, MI.
2Department of Biostatistics, University of Michigan, Ann Arbor, MI.
3Bioinformatics Program, University of Michigan, Ann Arbor, MI.
4Department of Microbiology and Immunology, University of Michigan, Ann Arbor, MI.

*To whom correspondence should be addressed. Dr. Yongqun He, E-mail: yongqunh{at}umich.edu


   Abstract

Summary: CRCView is a user-friendly point-and-click web server for analyzing and visualizing microarray gene expression data using a Dirichlet process mixture model-based clustering algorithm. CRCView is designed to clustering genes based on their expression profiles. It allows flexible input data format, rich graphical illustration, as well as integrated GO term based annotation/interpretation of clustering results.

Availability: http://helab.bioinformatics.med.umich.edu/crcview/

Associate Editor: Dr. Olga Troyanskaya


Received on March 15, 2007; revised on April 22, 2007; accepted on April 26, 2007

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