Skip Navigation



Bioinformatics Advance Access published online on June 22, 2007
Bioinformatics, doi:10.1093/bioinformatics/btm331
This Article
Right arrow Advance Access manuscript (PDF) Freely available
Right arrow All Versions of this Article:
23/17/2334    most recent
btm331v2
btm331v1
Right arrow Comments: Submit a response
Right arrow Alert me when this article is cited
Right arrow Alert me when Comments are posted
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Deng, W.
Right arrow Articles by Mullins, J. I.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Deng, W.
Right arrow Articles by Mullins, J. I.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

© The Author (2007). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

ViroBLAST: A standalone BLAST web server for flexible queries of multiple databases and user’s datasets

Wenjie Deng , David C. Nickle , Gerald H. Learn , Brandon Maust and James I. Mullins *

Department of Microbiology, University of Washington School of Medicine, Seattle, WA 98195, USA

*To whom correspondence should be addressed. James I. Mullins, E-mail: jmullins{at}u.washington.edu


  Abstract

Summary: ViroBLAST is a standalone BLAST web interface for nucleotide and amino acid sequence similarity searches. It extends the utility of BLAST to query against multiple sequence databases and user sequence datasets, and provides a friendly output to easily parse and navigate BLAST results. ViroBLAST is readily useful for all research areas that require BLAST functions and is available online and as a downloadable archive for independent installation.

Availability: http://indra.mullins.microbiol.washington.edu/blast/viroblast.php

Associate Editor: Prof. Thomas Lengauer

Received on April 7, 2007; revised on June 7, 2007; accepted on June 16, 2007

Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 BioinformaticsHome page
J. Ramana and D. Gupta
ProtVirDB: a database of protozoan virulent proteins
Bioinformatics, June 15, 2009; 25(12): 1568 - 1569.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
X. Xu, J. Wu, J. Xiao, Y. Tan, Q. Bao, F. Zhao, and X. Li
PlasmoGF: an integrated system for comparative genomics and phylogenetic analysis of Plasmodium gene families
Bioinformatics, May 1, 2008; 24(9): 1217 - 1220.
[Abstract] [Full Text] [PDF]


Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.