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Bioinformatics Advance Access published online on May 3, 2008
Bioinformatics, doi:10.1093/bioinformatics/btn137
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© The Author (2008). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

Mireval: a web tool for simple microRNA prediction in genome sequences

William Ritchie 1,2,*, François-Xavier Théodule 1 and Daniel Gautheret 3

1Université de la Méditerranée; INSERM ERM 206 ; Luminy Case 906; 13288 Marseille, Cedex 09; France.
2Centenary Institute; Gene & Stem Cell Therapy Program; Newtown, 2042 Sydney; Australia.
3Univ Paris-Sud 11; CNRS UMR 8621; Institut de Génétique et Microbiologie, Bat 400; 91405 Orsay Cedex; France.

*To whom correspondence should be addressed. William Ritchie, E-mail: W.Ritchie{at}centenary.org.au


  Abstract

Summary: We have developed an online tool called mirEval which can search sequences of up to 10,000nt for novel microRNAs in multiple organisms. It is a comprehensive tool, easy to use and very informative. It will allow users with no prior knowledge of in-silico detection of microRNAs to take advantage of the most successful approaches to investigate sequences of interest

Availability: The mirEval web server is available at http://tagc.univ-mrs.fr/mireval

Contact: W.Ritchie{at}centenary.org.au

Associate Editor: Prof. Dmitrij Frishman

Received on February 25, 2008; revised on April 10, 2008; accepted on April 10, 2008

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