Skip Navigation



Bioinformatics Advance Access published online on February 19, 2009
Bioinformatics, doi:10.1093/bioinformatics/btp105
This Article
Right arrow Advance Access manuscript (PDF)
Right arrow All Versions of this Article:
25/8/1096    most recent
btp105v1
Right arrow Comments: Submit a response
Right arrow Alert me when this article is cited
Right arrow Alert me when Comments are posted
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Moura, A.
Right arrow Articles by Correia, A.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Moura, A.
Right arrow Articles by Correia, A.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

© The Author (2009). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

INTEGRALL: a database and search engine for integrons, integrases and gene cassettes

Alexandra Moura 1,*, Mário Soares 2, Carolina Pereira 3, Nuno Leitão 2, Isabel Henriques 1 and António Correia 1

1 CESAM & Department of Biology, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
2 Sindesi – Informatic Systems and Solutions Lda., Rua Manuel Barbuda e Vasconcelos, 62-2D, 3810-498 Aveiro, Portugal
3 Department of Biology, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal

*To whom correspondence should be addressed. Ms. Alexandra Moura, E-mail: amoura{at}ua.pt


  Abstract

Summary: INTEGRALL is a freely available, text-based search system developed with the aim of collecting and organizing information on integrons in a single database. The current release (1.2) contains more than 4800 integron sequences and provides a public genetic repository for sequence data and nomenclature, offering scientists an easy and interactive access to integron's DNA sequences, their molecular arrangements as well as their genetic contexts.

Availability: http://integrall.bio.ua.pt

Contact: amoura{at}ua.pt

Associate Editor: Dr. Alex Bateman

Received on September 29, 2008; revised on February 16, 2009; accepted on February 17, 2009

Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 Nucleic Acids ResHome page
R. Leplae, G. Lima-Mendez, and A. Toussaint
ACLAME: A CLAssification of Mobile genetic Elements, update 2010
Nucleic Acids Res., November 23, 2009; (2009) gkp938v1.
[Abstract] [Full Text] [PDF]

Home page
 Appl. Environ. Microbiol.Home page
C. M. Rodriguez-Minguela, J. H. A. Apajalahti, B. Chai, J. R. Cole, and J. M. Tiedje
Worldwide Prevalence of Class 2 Integrases outside the Clinical Setting Is Associated with Human Impact
Appl. Envir. Microbiol., August 1, 2009; 75(15): 5100 - 5110.
[Abstract] [Full Text] [PDF]


Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.