Bioinformatics

ORIGINAL PAPERS:

Richard M. Karp and Lee A. Newberg

An algorithm for analysing probed partial digestion experiments
Comput. Appl. Biosci. 1995 11: 229-235; doi:10.1093/bioinformatics/11.3.229 [Abstract] [Print PDF] [Request Permissions]  

Sungwon Jung, Stephen Perkins, Yang Zhong, Sakti Pramanik, and John Beaman

A new data model for biological classification
Comput. Appl. Biosci. 1995 11: 237-246; doi:10.1093/bioinformatics/11.3.237 [Abstract] [Print PDF] [Request Permissions]  

Andy Purvis and Andrew Rambaut

Comparative analysis by independent contrasts (CAIC): an Apple Macintosh application for analysing comparative data
Comput. Appl. Biosci. 1995 11: 247-251; doi:10.1093/bioinformatics/11.3.247 [Abstract] [Print PDF] [Request Permissions]  

Francesco Vivarelli, Giuliano Giusti, Marco Villani, Renato Campanini, Piero Fariselli, Mario Compiani, and Rita Casadio

LGANN: a parallel system combining a local genetic algorithm and neural networks for the prediction of secondary structure of proteins
Comput. Appl. Biosci. 1995 11: 253-260; doi:10.1093/bioinformatics/11.3.253 [Abstract] [Print PDF] [Request Permissions]  

H. Cantalloube, G. Labesse, J. Chomilier, C. Nahum, Y.Y. Cho, V. Chams, A. Achour, A. Lachgar, J.P. Mbika, W. Issing, J.P. Mornon, B. Bizzini, D. Zagury, and J.-F. Zagury

Automat and BLAST: comparison of two protein sequence similarity search programs
Comput. Appl. Biosci. 1995 11: 261-272; doi:10.1093/bioinformatics/11.3.261 [Abstract] [Print PDF] [Request Permissions]  

Christian Fondrat and Phillippe Dessen

A rapid access motif database (RAMdb) with a search algorithm for the retrieval patterns in nucleic acids or protein databanks
Comput. Appl. Biosci. 1995 11: 273-279; doi:10.1093/bioinformatics/11.3.273 [Abstract] [Print PDF] [Request Permissions]  

M. Bansal, D. Bhattacharyya, and B. Ravi

NUPARM and NUCGEN: software for analysis and generation of sequence dependent nucleic acid structures
Comput. Appl. Biosci. 1995 11: 281-287; doi:10.1093/bioinformatics/11.3.281 [Abstract] [Print PDF] [Request Permissions]  

M. Bansal, D. Bhattacharyya, and S. Vijaylakshmi

NUVIEW: software for display and interactive manipulation of nucleic acid models
Comput. Appl. Biosci. 1995 11: 289-292; doi:10.1093/bioinformatics/11.3.289 [Abstract] [Print PDF] [Request Permissions]  

T.Murlidharan Nair, Sanjeev S. Tambe, and B.D. Kulkarni

Analysis of transcription control signals using artificial neural networks
Comput. Appl. Biosci. 1995 11: 293-300; doi:10.1093/bioinformatics/11.3.293 [Abstract] [Print PDF] [Request Permissions]  

Oswaldo Trelles-Salazar, Emilio L. Zapata, Joaquín Dopazo, Andrew F.W. Coulson, and José-María Carazo

An image-processing approach to dotplots: an X-Window-based program for interactive analysis of dotplots derived from sequence and structural data
Comput. Appl. Biosci. 1995 11: 301-308; doi:10.1093/bioinformatics/11.3.301 [Abstract] [Print PDF] [Request Permissions]  

M. Reczko, A. Hatzigeorigiou, N. Mache, A. Zell, and S. Suhai

A parallel neural network simulator on the connection machine CM-5
Comput. Appl. Biosci. 1995 11: 309-315; doi:10.1093/bioinformatics/11.3.309 [Abstract] [Print PDF] [Request Permissions]  

Gautam B. Singh and A. Krawetz

DNAView: A quality assessment tool for the visualization of large sequenced regions
Comput. Appl. Biosci. 1995 11: 317-319; doi:10.1093/bioinformatics/11.3.317 [Abstract] [Print PDF] [Request Permissions]  

J. Thioulouse and J.R. Lobry

Co-inertia analysis of amino-acid physico-chemical properties and protein composition with the ADE package
Comput. Appl. Biosci. 1995 11: 321-329; doi:10.1093/bioinformatics/11.3.321 [Abstract] [Print PDF] [Request Permissions]  

COMMUNICATION:

A.A. Mironov, N.N. Alexandrov, N.Yu. Bogodarova, A. Grigorjev, V.F. Lebedev, L.V. Lunovskaya, M.E. Truchan, and P.A. Pevzner

DNASUN: a package of computer programs for the biotechnology laboratory
Comput. Appl. Biosci. 1995 11: 331-335; doi:10.1093/bioinformatics/11.3.331 [Abstract] [Print PDF] [Request Permissions]  

SOFTWARE REVIEW:

Trevor Bryant

Reference Manager v. 6.0 Windows
Comput. Appl. Biosci. 1995 11: 337-338; doi:10.1093/bioinformatics/11.3.337 [Print PDF] [Request Permissions]  

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