Bioinformatics

ORIGINAL PAPERS:

Kathleen M. Currey and Bruce A. Shapiro

Secondary structure computer prediction of the poliovirus 5' non-coding region is improved by a genetic algorithm
Comput. Appl. Biosci. 1997 13: 1-12; doi:10.1093/bioinformatics/13.1.1 [Abstract] [Print PDF] [Request Permissions]  

Gareth Chelvanayagam and Simon Easteal

Correlating patterns in alignments of polymorphic sequences with experimental assays
Comput. Appl. Biosci. 1997 13: 13-22; doi:10.1093/bioinformatics/13.1.13 [Abstract] [Print PDF] [Request Permissions]  

A.A. Salamov and V.V. Solovyev

Recognition of 3' -processing sites of human mRNA precursors
Comput. Appl. Biosci. 1997 13: 23-28; doi:10.1093/bioinformatics/13.1.23 [Abstract] [Print PDF] [Request Permissions]  

Qing K. Chen, Gerald Z. Hertz, and Gary D. Stormo

PromFD 1.0: a computer program that predicts eukaryotic pol II promoters using strings and IMD matrices
Comput. Appl. Biosci. 1997 13: 29-35; doi:10.1093/bioinformatics/13.1.29 [Abstract] [Print PDF] [Request Permissions]  

E. V. Korotkov, M.A. Korotkova, and J. S. Tulko

Latent sequence periodicity of some oncogenes and DNA-binding protein genes
Comput. Appl. Biosci. 1997 13: 37-44; doi:10.1093/bioinformatics/13.1.37 [Abstract] [Print PDF] [Request Permissions]  

J.Alicia Grice, Richard Hughey, and Don Speck

Reduced space sequence alignment
Comput. Appl. Biosci. 1997 13: 45-53; doi:10.1093/bioinformatics/13.1.45 [Abstract] [Print PDF] [Request Permissions]  

Benny Shomer

EMBL sequence submission system—an object-oriented approach to developing interactive data collection systems through the WWW
Comput. Appl. Biosci. 1997 13: 55-60; doi:10.1093/bioinformatics/13.1.55 [Abstract] [Print PDF] [Request Permissions]  

Christine Hoogland and Christian Biémont

DROSOPOSON: a knowledge base on chromosomal localization of transposable element insertions in Drosophila
Comput. Appl. Biosci. 1997 13: 61-68; doi:10.1093/bioinformatics/13.1.61 [Abstract] [Print PDF] [Request Permissions]  

Claude Chevalet, Jérôme Gouzy, and Magali SanCristobal-Gaudy

Regional assignment of genetic markers using a somatic cell hybrid panel: a WWW interactive program available for the pig genome
Comput. Appl. Biosci. 1997 13: 69-73; doi:10.1093/bioinformatics/13.1.69 [Abstract] [Print PDF] [Request Permissions]  

Kun-Mao Chao, Jinghui Zhang, James Ostell, and Webb Miller

A tool for aligning very similar DNA sequences
Comput. Appl. Biosci. 1997 13: 75-80; doi:10.1093/bioinformatics/13.1.75 [Abstract] [Print PDF] [Request Permissions]  

G. S. Miller and R. Fuchs

Post-processing of BLAST results using databases of clustered sequences
Comput. Appl. Biosci. 1997 13: 81-87; doi:10.1093/bioinformatics/13.1.81 [Abstract] [Print PDF] [Request Permissions]  

Kornelie Frech, Kerstin Quandt, and Thomas Werner

Software for the analysis of DNA sequence elements of transcription
Comput. Appl. Biosci. 1997 13: 89-97; doi:10.1093/bioinformatics/13.1.89 [Abstract] [Print PDF] [Request Permissions]  

Martin G. Roberts, David A. Phoenix, and Arthur R. Pewsey

An algorithm for the detection of surface-active helices with the potential to anchor proteins at the membrane interface
Comput. Appl. Biosci. 1997 13: 99-106; doi:10.1093/bioinformatics/13.1.99 [Abstract] [Print PDF] [Request Permissions]  

APPLICATIONS NOTES:

William Bains

Hexanucleotide frequency database
Comput. Appl. Biosci. 1997 13: 107-108; doi:10.1093/bioinformatics/13.1.107 [Print PDF] [Request Permissions]  

Kornelie Frech, Peter Dietze, and Thomas Werner

Consinspector 3.0: new library and enhanced functionality
Comput. Appl. Biosci. 1997 13: 109-110; doi:10.1093/bioinformatics/13.1.109 [Print PDF] [Request Permissions]  

A.S. Ivanov, A. B. Rumjantsev, V.S. Skvortsov, and A.I. Archakov

ONIX: an interactive PC program for the examination of protein 3D structure from PDB
Comput. Appl. Biosci. 1997 13: 111-113; doi:10.1093/bioinformatics/13.1.111 [Print PDF] [Request Permissions]  

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