Bioinformatics

ARTICLES:

A Klingenhoff, K Frech, K Quandt, and T Werner

Functional promoter modules can be detected by formal models independent of overall nucleotide sequence similarity
Bioinformatics 1999 15: 180-186; doi:10.1093/bioinformatics/15.3.180 [Abstract] [Print PDF] [Request Permissions]  

H Herzel, O Weiss, and EN Trifonov

10-11 bp periodicities in complete genomes reflect protein structure and DNA folding
Bioinformatics 1999 15: 187-193; doi:10.1093/bioinformatics/15.3.187 [Abstract] [Print PDF] [Request Permissions]  

JS Varre, JP Delahaye, and E Rivals

Transformation distances: a family of dissimilarity measures based on movements of segments
Bioinformatics 1999 15: 194-202; doi:10.1093/bioinformatics/15.3.194 [Abstract] [Print PDF] [Request Permissions]  

HP Lenhof, B Morgenstern, and K Reinert

An exact solution for the segment-to-segment multiple sequence alignment problem
Bioinformatics 1999 15: 203-210; doi:10.1093/bioinformatics/15.3.203 [Abstract] [Print PDF] [Request Permissions]  

B Morgenstern

DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment
Bioinformatics 1999 15: 211-218; doi:10.1093/bioinformatics/15.3.211 [Abstract] [Print PDF] [Request Permissions]  

S Moller, U Leser, W Fleischmann, and R Apweiler

EDITtoTrEMBL: a distributed approach to high-quality automated protein sequence annotation
Bioinformatics 1999 15: 219-227; doi:10.1093/bioinformatics/15.3.219 [Abstract] [Print PDF] [Request Permissions]  

W Fleischmann, S Moller, A Gateau, and R Apweiler

A novel method for automatic functional annotation of proteins
Bioinformatics 1999 15: 228-233; doi:10.1093/bioinformatics/15.3.228 [Abstract] [Print PDF] [Request Permissions]  

R Backofen, S Will, and E Bornberg-Bauer

Application of constraint programming techniques for structure prediction of lattice proteins with extended alphabets
Bioinformatics 1999 15: 234-242; doi:10.1093/bioinformatics/15.3.234 [Abstract] [Print PDF] [Request Permissions]  

M Rarey, B Kramer, and T Lengauer

Docking of hydrophobic ligands with interaction-based matching algorithms
Bioinformatics 1999 15: 243-250; doi:10.1093/bioinformatics/15.3.243 [Abstract] [Print PDF] [Request Permissions]  

T Pfeiffer, I Sanchez-Valdenebro, JC Nuno, F Montero, and S Schuster

METATOOL: for studying metabolic networks
Bioinformatics 1999 15: 251-257; doi:10.1093/bioinformatics/15.3.251 [Abstract] [Print PDF] [Request Permissions]  

C O'Donovan, MJ Martin, E Glemet, JJ Codani, and R Apweiler

Removing redundancy in SWISS-PROT and TrEMBL
Bioinformatics 1999 15: 258-259; doi:10.1093/bioinformatics/15.3.258 [Abstract] [Print PDF] [Request Permissions]  

Y Kallberg and B Persson

KIND-a non-redundant protein database
Bioinformatics 1999 15: 260-261; doi:10.1093/bioinformatics/15.3.260 [Abstract] [Print PDF] [Request Permissions]  

A Krause, P Nicodeme, E Bornberg-Bauer, M Rehmsmeier, and M Vingron

WWW access to the SYSTERS protein sequence cluster set
Bioinformatics 1999 15: 262-263; doi:10.1093/bioinformatics/15.3.262 [Abstract] [Print PDF] [Request Permissions]  

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