Bioinformatics

Abdelkrim Rachedi, Michael Rebhan, and Hong Xue

GABAagent: a system for integrating data on GABA receptors
Bioinformatics 2000 16: 301-312; doi:10.1093/bioinformatics/16.4.301 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

J. D. Parsons and P. Rodriguez-Tomé

JESAM: CORBA software components to create and publish EST alignments and clusters
Bioinformatics 2000 16: 313-325; doi:10.1093/bioinformatics/16.4.313 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Lars Juhl Jensen and Steen Knudsen

Automatic discovery of regulatory patterns in promoter regions based on whole cell expression data and functional annotation
Bioinformatics 2000 16: 326-333; doi:10.1093/bioinformatics/16.4.326 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Elena Rivas and Sean R. Eddy

The language of RNA: a formal grammar that includes pseudoknots
Bioinformatics 2000 16: 334-340; doi:10.1093/bioinformatics/16.4.334 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Andrea Califano

SPLASH: structural pattern localization analysis by sequential histograms
Bioinformatics 2000 16: 341-357; doi:10.1093/bioinformatics/16.4.341 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

A. G. Bachinsky, A. S. Frolov, A. N. Naumochkin, L. Ph. Nizolenko, and A. A. Yarigin

PROF_ PAT 1.3: Updated database of patterns used to detect local similarities
Bioinformatics 2000 16: 358-366; doi:10.1093/bioinformatics/16.4.358 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Pierre Baldi

On the convergence of a clustering algorithm for protein-coding regions in microbial genomes
Bioinformatics 2000 16: 367-371; doi:10.1093/bioinformatics/16.4.367 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Kunchur Guruprasad, Maheshuni S. Prasad, and Gundu R. Kumar

Database of Structural Motifs in Proteins
Bioinformatics 2000 16: 372-375; doi:10.1093/bioinformatics/16.4.372 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Pietro Lio and Marina Vannucci

Wavelet change-point prediction of transmembrane proteins
Bioinformatics 2000 16: 376-382; doi:10.1093/bioinformatics/16.4.376 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Marty J. Wolf, Simon Easteal, Margaret Kahn, Brendan D. McKay, and Lars S. Jermiin

TrExML: a maximum-likelihood approach for extensive tree-space exploration
Bioinformatics 2000 16: 383-394; doi:10.1093/bioinformatics/16.4.383 [Abstract] [Screen PDF] [Request Permissions]  

Andrew Rambaut

Estimating the rate of molecular evolution: incorporating non-contemporaneous sequences into maximum likelihood phylogenies
Bioinformatics 2000 16: 395-399; doi:10.1093/bioinformatics/16.4.395 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Patrick P. Rose and Bette T. Korber

Detecting hypermutations in viral sequences with an emphasis on G A hypermutation
Bioinformatics 2000 16: 400-401; doi:10.1093/bioinformatics/16.4.400 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

M. R. Pocock and T. J. P. Hubbard

A browser for expression data
Bioinformatics 2000 16: 402-403; doi:10.1093/bioinformatics/16.4.402 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Liam J. McGuffin, Kevin Bryson, and David T. Jones

The PSIPRED protein structure prediction server
Bioinformatics 2000 16: 404-405; doi:10.1093/bioinformatics/16.4.404 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

R. Gilmour

Taxonomic markup language: applying XML to systematic data
Bioinformatics 2000 16: 406-407; doi:10.1093/bioinformatics/16.4.406 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Kenneth F. Manly

Mathematica packages for simulation of experimental genetics
Bioinformatics 2000 16: 408-410; doi:10.1093/bioinformatics/16.4.408 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

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