Bioinformatics

David Hall, Suchendra M. Bhandarkar, Jonathan Arnold, and Tongzhang Jiang

Physical mapping with automatic capture of hybridization data
Bioinformatics 2001 17: 205-213; doi:10.1093/bioinformatics/17.3.205 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Thomas Kämpke, Markus Kieninger, and Michael Mecklenburg

Efficient primer design algorithms
Bioinformatics 2001 17: 214-225; doi:10.1093/bioinformatics/17.3.214 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Siu-wai Leung, Chris Mellish, and Dave Robertson

Basic Gene Grammars and DNA-ChartParser for language processing of Escherichia coli promoter DNA sequences
Bioinformatics 2001 17: 226-236; doi:10.1093/bioinformatics/17.3.226 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Pierre-François Baisnée, Pierre Baldi, Søren Brunak, and Anders Gorm Pedersen

Flexibility of the genetic code with respect to DNA structure
Bioinformatics 2001 17: 237-248; doi:10.1093/bioinformatics/17.3.237 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Kevin A. T. Silverstein, Elizabeth Shoop, James E. Johnson, and Ernest F. Retzel

MetaFam: a unified classification of protein families. I. Overview and statistics
Bioinformatics 2001 17: 249-261; doi:10.1093/bioinformatics/17.3.249 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Elizabeth Shoop, Kevin A. T. Silverstein, James E. Johnson, and Ernest F. Retzel

MetaFam: a unified classification of protein families. II. Schema and query capabilities
Bioinformatics 2001 17: 262-271; doi:10.1093/bioinformatics/17.3.262 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Andreas Heger and Liisa Holm

Picasso: generating a covering set of protein family profiles
Bioinformatics 2001 17: 272-279; doi:10.1093/bioinformatics/17.3.272 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

T. Andrew Ronneberg, Stephen J. Freeland, and Laura F. Landweber

Genview and Gencode : a pair of programs to test theories of genetic code evolution
Bioinformatics 2001 17: 280-281; doi:10.1093/bioinformatics/17.3.280 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Weizhong Li, Lukasz Jaroszewski, and Adam Godzik

Clustering of highly homologous sequences to reduce the size of large protein databases
Bioinformatics 2001 17: 282-283; doi:10.1093/bioinformatics/17.3.282 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Kurt S. Thorn and Andrew A. Bogan

ASEdb: a database of alanine mutations and their effects on the free energy of binding in protein interactions
Bioinformatics 2001 17: 284-285; doi:10.1093/bioinformatics/17.3.284 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Neema Jamshidi, Jeremy S. Edwards, Tom Fahland, George M. Church, and Bernhard O. Palsson

Dynamic simulation of the human red blood cell metabolic network
Bioinformatics 2001 17: 286-287; doi:10.1093/bioinformatics/17.3.286 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Pedro Mendes and Douglas B. Kell

MEG (Model Extender for Gepasi): a program for the modelling of complex, heterogeneous, cellular systems
Bioinformatics 2001 17: 288-289; doi:10.1093/bioinformatics/17.3.288 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Errata
Bioinformatics 2001 17: 290; doi:10.1093/bioinformatics/17.3.290 [Print PDF][Screen PDF] [Request Permissions]  

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