Bioinformatics

EDITORIAL:

Martin Vingron

Bioinformatics needs to adopt statistical thinking
Bioinformatics 2001 17: 389-390; doi:10.1093/bioinformatics/17.5.389 [Print PDF][Screen PDF] [Request Permissions]  

REVIEWS:

Webb Miller

Comparison of genomic DNA sequences: solved and unsolved problems
Bioinformatics 2001 17: 391-397; doi:10.1093/bioinformatics/17.5.391 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

ORIGINAL PAPERS:

J. Blazewicz, P. Formanowicz, M. Kasprzak, M. Jaroszewski, and W. T. Markiewicz

Construction of DNA restriction maps based on a simplified experiment
Bioinformatics 2001 17: 398-404; doi:10.1093/bioinformatics/17.5.398 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Alexander V. Lukashin and Rainer Fuchs

Analysis of temporal gene expression profiles: clustering by simulated annealing and determining the optimal number of clusters
Bioinformatics 2001 17: 405-414; doi:10.1093/bioinformatics/17.5.405 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Brian Gaschen, Carla Kuiken, Bette Korber, and Brian Foley

Retrieval and on-the-fly alignment of sequence fragments from the HIV database
Bioinformatics 2001 17: 415-418; doi:10.1093/bioinformatics/17.5.415 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Jeremy Buhler

Efficient large-scale sequence comparison by locality-sensitive hashing
Bioinformatics 2001 17: 419-428; doi:10.1093/bioinformatics/17.5.419 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Jonas S. Almeida, João A. Carriço, António Maretzek, Peter A. Noble, and Madilyn Fletcher

Analysis of genomic sequences by Chaos Game Representation
Bioinformatics 2001 17: 429-437; doi:10.1093/bioinformatics/17.5.429 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Tony Y. T. Chan

Unsupervised classification of noisy chromosomes
Bioinformatics 2001 17: 438-444; doi:10.1093/bioinformatics/17.5.438 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Ross D. King, Andreas Karwath, Amanda Clare, and Luc Dehaspe

The utility of different representations of protein sequence for predicting functional class
Bioinformatics 2001 17: 445-454; doi:10.1093/bioinformatics/17.5.445 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Joel R. Bock and David A. Gough

Predicting protein–protein interactions from primary structure
Bioinformatics 2001 17: 455-460; doi:10.1093/bioinformatics/17.5.455 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Moritz Y. Becker and Isabel Rojas

A graph layout algorithm for drawing metabolic pathways
Bioinformatics 2001 17: 461-467; doi:10.1093/bioinformatics/17.5.461 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Yury V. Bukhman and Jeffrey Skolnick

BioMolQuest: integrated database-based retrieval of protein structural and functional information
Bioinformatics 2001 17: 468-478; doi:10.1093/bioinformatics/17.5.468 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

APPLICATIONS NOTES:

Gráinne McGuire, Michael C. Denham, and David J. Balding

MAC5: Bayesian inference of phylogenetic trees from DNA sequences incorporating gaps
Bioinformatics 2001 17: 479-480; doi:10.1093/bioinformatics/17.5.479 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Louxin Zhang, Chew-Kiat Heng, and Tin Wee Tan

Cladogramer: incorporating haplotype frequency into cladogram analysis
Bioinformatics 2001 17: 481-482; doi:10.1093/bioinformatics/17.5.481 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Kazuhisa Ichikawa

A-Cell: graphical user interface for the construction of biochemical reaction models
Bioinformatics 2001 17: 483-484; doi:10.1093/bioinformatics/17.5.483 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

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