Bioinformatics

EDITORIAL:

Win Hide

ExScript: AN ‘EX’-CENTRIC APPROACH TO THE DESCRIPTION OF TRANSCRIPT DIVERSITY
Bioinformatics 2001 17: 485-486; doi:10.1093/bioinformatics/17.6.485 [Print PDF][Screen PDF] [Request Permissions]  

ORIGINAL PAPERS:

Eric Harley, Anthony Bonner, and Nathan Goodman

Uniform integration of genome mapping data using intersection graphs
Bioinformatics 2001 17: 487-494; doi:10.1093/bioinformatics/17.6.487 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

John Aach and George M. Church

Aligning gene expression time series with time warping algorithms
Bioinformatics 2001 17: 495-508; doi:10.1093/bioinformatics/17.6.495 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Pierre Baldi and Anthony D. Long

A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes
Bioinformatics 2001 17: 509-519; doi:10.1093/bioinformatics/17.6.509 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Olga Troyanskaya, Michael Cantor, Gavin Sherlock, Pat Brown, Trevor Hastie, Robert Tibshirani, David Botstein, and Russ B. Altman

Missing value estimation methods for DNA microarrays
Bioinformatics 2001 17: 520-525; doi:10.1093/bioinformatics/17.6.520 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Peter D. Karp, Suzanne Paley, and Jingchun Zhu

Database verification studies of SWISS-PROT and GenBank
Bioinformatics 2001 17: 526-532; doi:10.1093/bioinformatics/17.6.526 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Rolf Apweiler, Paul Kersey, Viv Junker, and Amos Bairoch

Technical comment to "Database verification studies of SWISS-PROT and GenBank" by Karp et al.
Bioinformatics 2001 17: 533-534; doi:10.1093/bioinformatics/17.6.533 [Print PDF][Screen PDF] [Request Permissions]  

Ingrid B. Jakobsen, Jennifer A. Saleeba, Michael Poidinger, and Timothy G. Littlejohn

TreeGeneBrowser: phylogenetic data mining of gene sequences from public databases
Bioinformatics 2001 17: 535-540; doi:10.1093/bioinformatics/17.6.535 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Charlotte M. Deane, Quentin Kaas, and Tom L. Blundell

SCORE: predicting the core of protein models
Bioinformatics 2001 17: 541-550; doi:10.1093/bioinformatics/17.6.541 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Robert Garian

Prediction of quaternary structure from primary structure
Bioinformatics 2001 17: 551-556; doi:10.1093/bioinformatics/17.6.551 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

DISCOVERY NOTES:

Dong Qi and A. Jamie Cuticchia

Compositional symmetries in complete genomes
Bioinformatics 2001 17: 557-559; doi:10.1093/bioinformatics/17.6.557 [Print PDF][Screen PDF] [Request Permissions]  

John M. Ward

Identification of novel families of membrane proteins from the model plant Arabidopsis thaliana
Bioinformatics 2001 17: 560-563; doi:10.1093/bioinformatics/17.6.560 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

APPLICATIONS NOTES:

Pierre R. Bushel, Hisham Hamadeh, Lee Bennett, Stella Sieber, Karla Martin, Emile F. Nuwaysir, Kate Johnson, Kelli Reynolds, Richard S. Paules, and Cynthia A. Afshari

MAPS: a microarray project system for gene expression experiment information and data validation
Bioinformatics 2001 17: 564-565; doi:10.1093/bioinformatics/17.6.564 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Michael E. Wall, Patricia A. Dyck, and Thomas S. Brettin

SVDMAN—singular value decomposition analysis of microarray data
Bioinformatics 2001 17: 566-568; doi:10.1093/bioinformatics/17.6.566 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Xuhua Xia and Zheng Xie

AMADA: analysis of microarray data
Bioinformatics 2001 17: 569-570; doi:10.1093/bioinformatics/17.6.569 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Birgitta Geier, Gabi Kastenmüller, Matthias Fellenberg, Hans-Werner Mewes, and Burkhard Morgenstern

The HIB database of annotated UniGene clusters
Bioinformatics 2001 17: 571-572; doi:10.1093/bioinformatics/17.6.571 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

A. Löytynoja and M. C. Milinkovitch

SOAP, cleaning multiple alignments from unstable blocks
Bioinformatics 2001 17: 573-574; doi:10.1093/bioinformatics/17.6.573 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Nicolas Le Novère and Thomas Simon Shimizu

STOCHSIM: modelling of stochastic biomolecular processes
Bioinformatics 2001 17: 575-576; doi:10.1093/bioinformatics/17.6.575 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Malay Kumar Basu

SeWeR: a customizable and integrated dynamic HTML interface to bioinformatics services
Bioinformatics 2001 17: 577-578; doi:10.1093/bioinformatics/17.6.577 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

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