Bioinformatics

EDITORIAL:

William R. Pearson

Training for bioinformatics and computational biology
Bioinformatics 2001 17: 761-762; doi:10.1093/bioinformatics/17.9.761 [Print PDF][Screen PDF] [Request Permissions]  

ORIGINAL PAPERS:

K. Y. Yeung and W. L. Ruzzo

Principal component analysis for clustering gene expression data
Bioinformatics 2001 17: 763-774; doi:10.1093/bioinformatics/17.9.763 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Jeanne Kowalski

A non-parametric approach to translating gene region heterogeneity associated with phenotype into location heterogeneity
Bioinformatics 2001 17: 775-790; doi:10.1093/bioinformatics/17.9.775 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Katsuhisa Horimoto, Satoshi Fukuchi, and Kentaro Mori

Comprehensive comparison between locations of orthologous genes on archaeal and bacterial genomes
Bioinformatics 2001 17: 791-802; doi:10.1093/bioinformatics/17.9.791 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Ian Holmes and William J. Bruno

Evolutionary HMMs: a Bayesian approach to multiple alignment
Bioinformatics 2001 17: 803-820; doi:10.1093/bioinformatics/17.9.803 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Christian M. Zmasek and Sean R. Eddy

A simple algorithm to infer gene duplication and speciation events on a gene tree
Bioinformatics 2001 17: 821-828; doi:10.1093/bioinformatics/17.9.821 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Ken-ichiro Fukuda and Toshihisa Takagi

Knowledge representation of signal transduction pathways
Bioinformatics 2001 17: 829-837; doi:10.1093/bioinformatics/17.9.829 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

APPLICATIONS NOTES:

Xiayi Ke, Andrew Collins, and Shu Ye

PIRA PCR designer for restriction analysis of single nucleotide polymorphisms
Bioinformatics 2001 17: 838-839; doi:10.1093/bioinformatics/17.9.838 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Jacques Colinge and Georg Feger

Detecting the impact of sequencing errors on SAGE data
Bioinformatics 2001 17: 840-842; doi:10.1093/bioinformatics/17.9.840 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Izabela Makalowska, Joseph F. Ryan, and Andreas D. Baxevanis

GeneMachine: gene prediction and sequence annotation
Bioinformatics 2001 17: 843-844; doi:10.1093/bioinformatics/17.9.843 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Leo Goodstadt and Chris P. Ponting

CHROMA: consensus-based colouring of multiple alignments for publication
Bioinformatics 2001 17: 845-846; doi:10.1093/bioinformatics/17.9.845 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Evgeni M. Zdobnov and Rolf Apweiler

InterProScan – an integration platform for the signature-recognition methods in InterPro
Bioinformatics 2001 17: 847-848; doi:10.1093/bioinformatics/17.9.847 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Gábor E. Tusnády and István Simon

The HMMTOP transmembrane topology prediction server
Bioinformatics 2001 17: 849-850; doi:10.1093/bioinformatics/17.9.849 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

John J. Salama, Howard J. Feldman, and Christopher W. V. Hogue

VISTRAJ: exploring protein conformational space
Bioinformatics 2001 17: 851-852; doi:10.1093/bioinformatics/17.9.851 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Anton J. Enright and Christos A. Ouzounis

BioLayout—an automatic graph layout algorithm for similarity visualization
Bioinformatics 2001 17: 853-854; doi:10.1093/bioinformatics/17.9.853 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Pentti Riikonen, Jorma Boberg, Tapio Salakoski, and Mauno Vihinen

BioWAP, mobile Internet service for bioinformatics
Bioinformatics 2001 17: 855-856; doi:10.1093/bioinformatics/17.9.855 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Kimberly F. Johnson and Simon M. Lin

Critical Assessment of Microarray Data Analysis: the 2001 challenge
Bioinformatics 2001 17: 857-858; doi:10.1093/bioinformatics/17.9.857 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

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