Bioinformatics

EDITORIAL:

Colin Campbell

New analytical techniques for the interpretation of microarray data
Bioinformatics 2003 19: 1045; doi:10.1093/bioinformatics/btg269 [Print PDF][Screen PDF] [Request Permissions]  

MICROARRAY WORKSHOP PAPERS:

Yanli Zhao and Wei Pan

Modified nonparametric approaches to detecting differentially expressed genes in replicated microarray experiments
Bioinformatics 2003 19: 1046-1054; doi:10.1093/bioinformatics/btf879 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Ernst Wit and John McClure

Statistical adjustment of signal censoring in gene expression experiments
Bioinformatics 2003 19: 1055-1060; doi:10.1093/bioinformatics/btg003 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Marcel Dettling and Peter Bühlmann

Boosting for tumor classification with gene expression data
Bioinformatics 2003 19: 1061-1069; doi:10.1093/bioinformatics/btf867 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Ziv Bar-Joseph, Erik D. Demaine, David K. Gifford, Nathan Srebro, Angèle M. Hamel, and Tommi S. Jaakkola

K-ary clustering with optimal leaf ordering for gene expression data
Bioinformatics 2003 19: 1070-1078; doi:10.1093/bioinformatics/btg030 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Gad Getz, Hilah Gal, Itai Kela, Daniel A. Notterman, and Eytan Domany

Coupled two-way clustering analysis of breast cancer and colon cancer gene expression data
Bioinformatics 2003 19: 1079-1089; doi:10.1093/bioinformatics/btf876 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Sandrine Dudoit and Jane Fridlyand

Bagging to improve the accuracy of a clustering procedure
Bioinformatics 2003 19: 1090-1099; doi:10.1093/bioinformatics/btg038 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Rebecka Jörnsten and Bin Yu

Simultaneous gene clustering and subset selection for sample classification via MDL
Bioinformatics 2003 19: 1100-1109; doi:10.1093/bioinformatics/btg039 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

David Horn and Inon Axel

Novel clustering algorithm for microarray expression data in a truncated SVD space
Bioinformatics 2003 19: 1110-1115; doi:10.1093/bioinformatics/btg053 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Torgeir R. Hvidsten, Astrid Lægreid, and Jan Komorowski

Learning rule-based models of biological process from gene expression time profiles using Gene Ontology
Bioinformatics 2003 19: 1116-1123; doi:10.1093/bioinformatics/btg047 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Hiroyuki Nakahara, Shin-ichi Nishimura, Masato Inoue, Gen Hori, and Shun-ichi Amari

Gene interaction in DNA microarray data is decomposed by information geometric measure
Bioinformatics 2003 19: 1124-1131; doi:10.1093/bioinformatics/btg098 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Yoonkyung Lee and Cheol-Koo Lee

Classification of multiple cancer types by multicategory support vector machines using gene expression data
Bioinformatics 2003 19: 1132-1139; doi:10.1093/bioinformatics/btg102 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Dennis J. Michaud, Adam G. Marsh, and Prasad S. Dhurjati

eXPatGen: generating dynamic expression patterns for the systematic evaluation of analytical methods
Bioinformatics 2003 19: 1140-1146; doi:10.1093/bioinformatics/btg132 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Tianjiao Chu, Clark Glymour, Richard Scheines, and Peter Spirtes

A statistical problem for inference to regulatory structure from associations of gene expression measurements with microarrays
Bioinformatics 2003 19: 1147-1152; doi:10.1093/bioinformatics/btg011 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

APPLICATIONS NOTE (MICROARRAY WORKSHOP PAPERS):

Gad Getz and Eytan Domany

Coupled two-way clustering server
Bioinformatics 2003 19: 1153-1154; doi:10.1093/bioinformatics/btg143 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

ORIGINAL PAPERS:

J. D. Thompson, J. C. Thierry, and O. Poch

RASCAL: rapid scanning and correction of multiple sequence alignments
Bioinformatics 2003 19: 1155-1161; doi:10.1093/bioinformatics/btg133 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

William H. Piel, Michael J. Sanderson, and Michael J. Donoghue

The small-world dynamics of tree networks and data mining in phyloinformatics
Bioinformatics 2003 19: 1162-1168; doi:10.1093/bioinformatics/btg131 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

M. Ginkel, A. Kremling, T. Nutsch, R. Rehner, and E. D. Gilles

Modular modeling of cellular systems with ProMoT/Diva
Bioinformatics 2003 19: 1169-1176; doi:10.1093/bioinformatics/btg128 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

APPLICATIONS NOTES:

Alexander K. Hudek, Joseph Cheung, Andrew P. Boright, and Stephen W. Scherer

Genescript: DNA sequence annotation pipeline
Bioinformatics 2003 19: 1177-1178; doi:10.1093/bioinformatics/btg134 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.