Skip Navigation

Receive this page by email each issue: [Sign up for eTOCs]

Contents: Volume 20, Number 18, December 12 2004   [Index by Author]       Other Issues: Previous Next  
       DISCOVERY NOTES
       ORIGINAL PAPERS
       APPLICATIONS NOTES
       ERRATA
Find articles in this issue containing these words:
[Search ALL Issues]


To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

DISCOVERY NOTES:

M. C. Accardo, E. Giordano, S. Riccardo, F. A. Digilio, G. Iazzetti, R. A. Calogero, and M. Furia
A computational search for box C/D snoRNA genes in the Drosophila melanogaster genome
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3293-3301; doi:10.1093/bioinformatics/bth394 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

André Catic, Cal Collins, George M. Church, and Hidde L. Ploegh
Preferred in vivo ubiquitination sites
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3302-3307; doi:10.1093/bioinformatics/bth407 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

ORIGINAL PAPERS:

Huai-Qiu Zhu, Gang-Qing Hu, Zheng-Qing Ouyang, Jin Wang, and Zhen-Su She
Accuracy improvement for identifying translation initiation sites in microbial genomes
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3308-3317; doi:10.1093/bioinformatics/bth390 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Joanna H. Shih, Aleksandra M. Michalowska, Kevin Dobbin, Yumei Ye, Ting Hu Qiu, and Jeffrey E. Green
Effects of pooling mRNA in microarray class comparisons
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3318-3325; doi:10.1093/bioinformatics/bth391 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Marco Masseroli, Andrea Stella, Natalia Meani, Myriam Alcalay, and Francesco Pinciroli
MyWEST: My Web Extraction Software Tool for effective mining of annotations from web-based databanks
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3326-3335; doi:10.1093/bioinformatics/bth392 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Yong Wang and Frederick C. C. Leung
DNA structure constraint is probably a fundamental factor inducing CpG deficiency in bacteria
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3336-3345; doi:10.1093/bioinformatics/bth393 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

István Albert and Réka Albert
Conserved network motifs allow protein–protein interaction prediction
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3346-3352; doi:10.1093/bioinformatics/bth402 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Raji Balasubramanian, Thomas LaFramboise, Denise Scholtens, and Robert Gentleman
A graph-theoretic approach to testing associations between disparate sources of functional genomics data
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3353-3362; doi:10.1093/bioinformatics/bth405 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Michael Roberts, Wayne Hayes, Brian R. Hunt, Stephen M. Mount, and James A. Yorke
Reducing storage requirements for biological sequence comparison
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3363-3369; doi:10.1093/bioinformatics/bth408 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Daniel M. McDonald, Hsinchun Chen, Hua Su, and Byron B. Marshall
Extracting gene pathway relations using a hybrid grammar: the Arizona Relation Parser
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3370-3378; doi:10.1093/bioinformatics/bth409 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Mehmet Bilgen, Mehmet Karaca, A. Naci Onus, and Ayse Gül Ince
A software program combining sequence motif searches with keywords for finding repeats containing DNA sequences
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3379-3386; doi:10.1093/bioinformatics/bth410 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Vitaly A. Selivanov, Joaquim Puigjaner, Antonio Sillero, Josep J. Centelles, Antonio Ramos-Montoya, Paul W.-N. Lee, and Marta Cascante
An optimized algorithm for flux estimation from isotopomer distribution in glucose metabolites
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3387-3397; doi:10.1093/bioinformatics/bth412 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Zheng Rong Yang, Andrew R. Dalby, and Jing Qiu
Mining HIV protease cleavage data using genetic programming with a sum-product function
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3398-3405; doi:10.1093/bioinformatics/bth414 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Lexin Li and Hongzhe Li
Dimension reduction methods for microarrays with application to censored survival data
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3406-3412; doi:10.1093/bioinformatics/bth415 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Philippe Hupé, Nicolas Stransky, Jean-Paul Thiery, François Radvanyi, and Emmanuel Barillot
Analysis of array CGH data: from signal ratio to gain and loss of DNA regions
Bioinformatics Advance Access published on September 20, 2004
Bioinformatics 2004 20: 3413-3422; doi:10.1093/bioinformatics/bth418 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Kyounghwa Bae and Bani K. Mallick
Gene selection using a two-level hierarchical Bayesian model
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3423-3430; doi:10.1093/bioinformatics/bth419 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Peter M. Haverty, Li-Li Hsiao, Steven R. Gullans, Ulla Hansen, and Zhiping Weng
Limited agreement among three global gene expression methods highlights the requirement for non-global validation
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3431-3441; doi:10.1093/bioinformatics/bth421 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Elizabeth Shoop, Paulo Casaes, Getiria Onsongo, Lisa Lesnett, Erla Osk Petursdottir, Edward Kofi Yeboah Donkor, Dennis Tkach, and Michael Cosimini
Data exploration tools for the Gene Ontology database
Bioinformatics Advance Access published on July 22, 2004
Bioinformatics 2004 20: 3442-3454; doi:10.1093/bioinformatics/bth425 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Tuan D. Pham and Johannes Zuegg
A probabilistic measure for alignment-free sequence comparison
Bioinformatics Advance Access published on July 22, 2004
Bioinformatics 2004 20: 3455-3461; doi:10.1093/bioinformatics/bth426 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Jeffrey A. Rosenfeld, Indra N. Sarkar, Paul J. Planet, David H. Figurski, and Rob DeSalle
ORFcurator: molecular curation of genes and gene clusters in prokaryotic organisms
Bioinformatics Advance Access published on July 22, 2004
Bioinformatics 2004 20: 3462-3465; doi:10.1093/bioinformatics/bth427 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Joyce Phui Yee Siew, Asif M. Khan, Paul T. J. Tan, Judice L. Y. Koh, Seng Hong Seah, Chuay Yeng Koo, Siaw Ching Chai, Arunmozhiarasi Armugam, Vladimir Brusic, and Kandiah Jeyaseelan
Systematic analysis of snake neurotoxins' functional classification using a data warehousing approach
Bioinformatics Advance Access published on July 22, 2004
Bioinformatics 2004 20: 3466-3480; doi:10.1093/bioinformatics/bth430 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Diane J. Rodi, Suneeta Mandava, and Lee Makowski
DIVAA: analysis of amino acid diversity in multiple aligned protein sequences
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3481-3489; doi:10.1093/bioinformatics/bth432 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Kodangattil R. Sreekumar, Youping Huang, Mark H. Pausch, and Kamalakar Gulukota
Predicting GPCR–G-protein coupling using hidden Markov models
Bioinformatics Advance Access published on August 5, 2004
Bioinformatics 2004 20: 3490-3499; doi:10.1093/bioinformatics/bth434 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Soojin Lee, Min-Kyu Cho, Jin-Won Jung, Jai-Hoon Kim, and Weontae Lee
Exploring protein fold space by secondary structure prediction using data distribution method on Grid platform
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3500-3507; doi:10.1093/bioinformatics/bth435 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

N. Przulj, D. G. Corneil, and I. Jurisica
Modeling interactome: scale-free or geometric?
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3508-3515; doi:10.1093/bioinformatics/bth436 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Robert Osada, Elena Zaslavsky, and Mona Singh
Comparative analysis of methods for representing and searching for transcription factor binding sites
Bioinformatics Advance Access published on August 5, 2004
Bioinformatics 2004 20: 3516-3525; doi:10.1093/bioinformatics/bth438 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Anton Yuryev, Jianping Huang, Kathryn E. Scott, Jennifer Kuebler, Miriam Donaldson, Michael S. Phillips, Mark Pohl, and Michael T. Boyce-Jacino
Primer Design and Marker Clustering for Multiplex SNP-IT Primer Extension Genotyping Assay using Statistical Modeling
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3526-3532; doi:10.1093/bioinformatics/bth439 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Chad L. Myers, Maitreya J. Dunham, S. Y. Kung, and Olga G. Troyanskaya
Accurate detection of aneuploidies in array CGH and gene expression microarray data
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3533-3543; doi:10.1093/bioinformatics/bth440 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Roland Linder, Dawn Dew, Holger Sudhoff, Dirk Theegarten, Klaus Remberger, Siegfried J. Pöppl, and Mathias Wagner
The ‘subsequent artificial neural network’ (SANN) approach might bring more classificatory power to ANN-based DNA microarray analyses
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3544-3552; doi:10.1093/bioinformatics/bth441 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Markus Neuhäuser and Roswitha Senske
The Baumgartner-Weiß-Schindler test for the detection of differentially expressed genes in replicated microarray experiments
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3553-3564; doi:10.1093/bioinformatics/bth442 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Alberto de la Fuente, Nan Bing, Ina Hoeschele, and Pedro Mendes
Discovery of meaningful associations in genomic data using partial correlation coefficients
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3565-3574; doi:10.1093/bioinformatics/bth445 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Markus Anderle, Sushmita Roy, Hua Lin, Christopher Becker, and Keith Joho
Quantifying reproducibility for differential proteomics: noise analysis for protein liquid chromatography-mass spectrometry of human serum
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3575-3582; doi:10.1093/bioinformatics/bth446 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Marcel Dettling
BagBoosting for tumor classification with gene expression data
Bioinformatics Advance Access published on October 5, 2004
Bioinformatics 2004 20: 3583-3593; doi:10.1093/bioinformatics/bth447 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Jing Yu, V. Anne Smith, Paul P. Wang, Alexander J. Hartemink, and Erich D. Jarvis
Advances to Bayesian network inference for generating causal networks from observational biological data
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3594-3603; doi:10.1093/bioinformatics/bth448 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Minlie Huang, Xiaoyan Zhu, Yu Hao, Donald G. Payan, Kunbin Qu, and Ming Li
Discovering patterns to extract protein–protein interactions from full texts
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3604-3612; doi:10.1093/bioinformatics/bth451 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Kyoung-Jae Won, Adam Prügel-Bennett, and Anders Krogh
Training HMM structure with genetic algorithm for biological sequence analysis
Bioinformatics Advance Access published on August 5, 2004
Bioinformatics 2004 20: 3613-3619; doi:10.1093/bioinformatics/bth454 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Matthias Koenig and Niels Grabe
Highly specific prediction of phosphorylation sites in proteins
Bioinformatics Advance Access published on August 5, 2004
Bioinformatics 2004 20: 3620-3627; doi:10.1093/bioinformatics/bth455 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Jim Samuelsson, Daniel Dalevi, Fredrik Levander, and Thorsteinn Rögnvaldsson
Modular, scriptable and automated analysis tools for high-throughput peptide mass fingerprinting
Bioinformatics Advance Access published on August 5, 2004
Bioinformatics 2004 20: 3628-3635; doi:10.1093/bioinformatics/bth460 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

APPLICATIONS NOTES:

Kees Jong, Elena Marchiori, Gerrit Meijer, A. v. d. Vaart, and Bauke Ylstra
Breakpoint identification and smoothing of array comparative genomic hybridization data
Bioinformatics Advance Access published on June 16, 2004
Bioinformatics 2004 20: 3636-3637; doi:10.1093/bioinformatics/bth355 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

O. J. Shaw, C. Harwood, L. J. Steggles, and A. Wipat
SARGE: a tool for creation of putative genetic networks
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3638-3640; doi:10.1093/bioinformatics/bth395 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Steffen Durinck, Joke Allemeersch, Vincent J. Carey, Yves Moreau, and Bart De Moor
Importing MAGE-ML format microarray data into BioConductor
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3641-3642; doi:10.1093/bioinformatics/bth396 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Brian J. Haas, Arthur L. Delcher, Jennifer R. Wortman, and Steven L. Salzberg
DAGchainer: a tool for mining segmental genome duplications and synteny
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3643-3646; doi:10.1093/bioinformatics/bth397 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Dirk Steinhauser, Björn Usadel, Alexander Luedemann, Oliver Thimm, and Joachim Kopka
CSB.DB: a comprehensive systems-biology database
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3647-3651; doi:10.1093/bioinformatics/bth398 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Paolo Di Giovine
PLPMDB: Pyridoxal-5'-phosphate dependent enzymes mutants database
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3652-3653; doi:10.1093/bioinformatics/bth399 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Kristoffer Forslund, Daniel H. Huson, and Vincent Moulton
VisRD—visual recombination detection
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3654-3655; doi:10.1093/bioinformatics/bth400 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Juan M. Vaquerizas, Joaquín Dopazo, and Ramón Díaz-Uriarte
DNMAD: web-based diagnosis and normalization for microarray data
Bioinformatics Advance Access published on July 9, 2004
Bioinformatics 2004 20: 3656-3658; doi:10.1093/bioinformatics/bth401 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Simon M. Lin, Patrick McConnell, Kimberly F. Johnson, and Jennifer Shoemaker
MedlineR: an open source library in R for Medline literature data mining
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3659-3661; doi:10.1093/bioinformatics/bth404 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Aaron Kaluszka and Cynthia Gibas
Interactive gene-order comparison for multiple small genomes
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3662-3664; doi:10.1093/bioinformatics/bth406 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Christophe Hitte, Thomas Derrien, Catherine André, Elaine A. Ostrander, and Francis Galibert
CRH_Server: an online comparative and radiation hybrid mapping server for the canine genome
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3665-3667; doi:10.1093/bioinformatics/bth411 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Shaolin Liu, Nicholas A. Tinker, Stephen J. Molnar, and Diane E. Mather
EC_oligos: automated and whole-genome primer design for exons within one or between two genomes
Bioinformatics Advance Access published on July 22, 2004
Bioinformatics 2004 20: 3668-3669; doi:10.1093/bioinformatics/bth413 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Giacomo Finocchiaro, Paola Parise, Simone P. Minardi, Myriam Alcalay, and Heiko Müller
GenePicker: replicate analysis of Affymetrix gene expression microarrays
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3670-3672; doi:10.1093/bioinformatics/bth416 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Chris C. A. Spencer and Graham Coop
SelSim: a program to simulate population genetic data with natural selection and recombination
Bioinformatics Advance Access published on July 22, 2004
Bioinformatics 2004 20: 3673-3675; doi:10.1093/bioinformatics/bth417 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Andreas Gisel, Maria Panetta, Giorgio Grillo, Vito Flavio Licciulli, Sabino Liuni, Cecilia Saccone, and Graziano Pesole
DNAfan: a software tool for automated extraction and analysis of user-defined sequence regions
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3676-3679; doi:10.1093/bioinformatics/bth420 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Marc Vass, Nicholas Allen, Clifford A. Shaffer, Naren Ramakrishnan, Layne T. Watson, and John J. Tyson
The JigCell Model Builder and Run Manager
Bioinformatics Advance Access published on July 23, 2004
Bioinformatics 2004 20: 3680-3681; doi:10.1093/bioinformatics/bth422 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Peter F. Hallin and David W. Ussery
CBS Genome Atlas Database: a dynamic storage for bioinformatic results and sequence data
Bioinformatics Advance Access published on July 15, 2004
Bioinformatics 2004 20: 3682-3686; doi:10.1093/bioinformatics/bth423 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Nicholas Knowlton, Igor M. Dozmorov, and Michael Centola
Microarray Data Analysis Toolbox (MDAT): for normalization, adjustment and analysis of gene expression data
Bioinformatics Advance Access published on July 22, 2004
Bioinformatics 2004 20: 3687-3690; doi:10.1093/bioinformatics/bth424 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Chia-Chin Wu, Hsuan-Cheng Huang, Hsueh-Fen Juan, and Shui-Tein Chen
GeneNetwork: an interactive tool for reconstruction of genetic networks using microarray data
Bioinformatics Advance Access published on July 22, 2004
Bioinformatics 2004 20: 3691-3693; doi:10.1093/bioinformatics/bth428 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Vincent Catherinot and Gilles Labesse
ViTO: tool for refinement of protein sequence–structure alignments
Bioinformatics Advance Access published on July 22, 2004
Bioinformatics 2004 20: 3694-3696; doi:10.1093/bioinformatics/bth429 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Yuan Qi and Nick V. Grishin
PCOAT: positional correlation analysis using multiple methods
Bioinformatics Advance Access published on July 22, 2004
Bioinformatics 2004 20: 3697-3699; doi:10.1093/bioinformatics/bth431 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Peter E. Midford
Ontologies for Behavior
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3700-3701; doi:10.1093/bioinformatics/bth433 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Tancred Frickey and Andrei Lupas
CLANS: a Java application for visualizing protein families based on pairwise similarity
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3702-3704; doi:10.1093/bioinformatics/bth444 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

James M. Wettenhall and Gordon K. Smyth
limmaGUI: A graphical user interface for linear modeling of microarray data
Bioinformatics Advance Access published on August 5, 2004
Bioinformatics 2004 20: 3705-3706; doi:10.1093/bioinformatics/bth449 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

J. L. Pons, T. E. Malliavin, D. Tramesel, and M. A. Delsuc
NMRb: a web-site repository for raw NMR datasets
Bioinformatics Advance Access published on July 29, 2004
Bioinformatics 2004 20: 3707-3709; doi:10.1093/bioinformatics/bth450 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

Elizabeth I. Boyle, Shuai Weng, Jeremy Gollub, Heng Jin, David Botstein, J. Michael Cherry, and Gavin Sherlock
GO::TermFinder—open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes
Bioinformatics Advance Access published on August 5, 2004
Bioinformatics 2004 20: 3710-3715; doi:10.1093/bioinformatics/bth456 [Abstract] [Print PDF][Screen PDF] [Request Permissions]  

ERRATA:

Weijia Xu and Daniel P. Miranke
A metric model of amino acid substitution
Bioinformatics 2004 20: 3716; doi:10.1093/bioinformatics/bti150 [Print PDF][Screen PDF] [Request Permissions]  

To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.