Bioinformatics

ORIGINAL PAPERS:

P. Paz, J. Renau Piqueras, and E.J. Tizado

A program for the application of the radial distribution function to cluster analysis in cell biology
Comput. Appl. Biosci. 1992 8: 307-309; doi:10.1093/bioinformatics/8.4.307 [Abstract] [Print PDF] [Request Permissions]  

Nabil N. Kamel

A profile for molecular biology databases and information resources
Comput. Appl. Biosci. 1992 8: 311-321; doi:10.1093/bioinformatics/8.4.311 [Abstract] [Print PDF] [Request Permissions]  

I.G. Badcoe

A fast algorithm for counting the arrangements for packing identical items on a one-dimensional grid with application in DNA—protein and similar interactions
Comput. Appl. Biosci. 1992 8: 323-330; doi:10.1093/bioinformatics/8.4.323 [Abstract] [Print PDF] [Request Permissions]  

K. Hofmann and W. Stoffel

PROFILEGRAPH: an interactive graphical tool for protein sequence analysis
Comput. Appl. Biosci. 1992 8: 331-337; doi:10.1093/bioinformatics/8.4.331 [Abstract] [Print PDF] [Request Permissions]  

Nickolai N. Alexandrov

Local multiple alignment by consensus matrix
Comput. Appl. Biosci. 1992 8: 339-345; doi:10.1093/bioinformatics/8.4.339 [Abstract] [Print PDF] [Request Permissions]  

Peter D. Karp

A knowledge base of the chemical compounds of intermediary metabolism
Comput. Appl. Biosci. 1992 8: 347-357; doi:10.1093/bioinformatics/8.4.347 [Abstract] [Print PDF] [Request Permissions]  

Alan Fielding

Applications of fractal geometry to biology
Comput. Appl. Biosci. 1992 8: 359-366; doi:10.1093/bioinformatics/8.4.359 [Abstract] [Print PDF] [Request Permissions]  

Mineichi Kudo, Sumie Kitamura-Abe, Masaru Shimbo, and Yôichi lida

Analysis of context of 5'-splice site sequences in mammalian mRNA precursors by subclass method
Comput. Appl. Biosci. 1992 8: 367-376; doi:10.1093/bioinformatics/8.4.367 [Abstract] [Print PDF] [Request Permissions]  

Robert Jones

Sequence pattern matching on a massively parallel computer
Comput. Appl. Biosci. 1992 8: 377-383; doi:10.1093/bioinformatics/8.4.377 [Abstract] [Print PDF] [Request Permissions]  

José A. López-Bueno and Andrés Moya

GEOSEQ: A Pascal program to calculate statistical geometry parameters of aligned nucleic acid sequences
Comput. Appl. Biosci. 1992 8: 385-388; doi:10.1093/bioinformatics/8.4.385 [Abstract] [Print PDF] [Request Permissions]  

Michael Schmitz and Gerhard Steger

Base-pair probability profiles of RNA secondary structures
Comput. Appl. Biosci. 1992 8: 389-399; doi:10.1093/bioinformatics/8.4.389 [Abstract] [Print PDF] [Request Permissions]  

James Lee

Comparison of variance between correlated samples
Comput. Appl. Biosci. 1992 8: 405-406; doi:10.1093/bioinformatics/8.4.405 [Print PDF] [Request Permissions]  

Robert L. Read, Dan Davison, Jack E. Chappelear, and John S. Garavelli

GBPARSE: a parser for the GenBank flat–file format with the new feature table format
Comput. Appl. Biosci. 1992 8: 407-408; doi:10.1093/bioinformatics/8.4.407 [Print PDF] [Request Permissions]  

F. Dessaint

Chull.sas: an SAS macro to construct the convex hull of one (or more) finite sets of points in a plane
Comput. Appl. Biosci. 1992 8: 409; doi:10.1093/bioinformatics/8.4.409 [Print PDF] [Request Permissions]  

APPLICATIONS NOTES:

Jan Mrázek and Jaroslav Kypr

DNABIND: an interactive microcomputer program searching for nucleotide sequences that may code for conserved DNA-binding protein motifs
Comput. Appl. Biosci. 1992 8: 401-404; doi:10.1093/bioinformatics/8.4.401 [Abstract] [Print PDF] [Request Permissions]  

UPDATE:

Alan H. Fielding

News and Views
Comput. Appl. Biosci. 1992 8: 411-416; doi:10.1093/bioinformatics/8.4.411 [Print PDF] [Request Permissions]  

BOOK REVIEW:

Richard V. Kelly, Jr

CABIOS BOOK REVIEWS
Comput. Appl. Biosci. 1992 8: 417-418; doi:10.1093/bioinformatics/8.4.417 [Print PDF] [Request Permissions]  

BOOK REVIEWS:

C. Mitchell

BOOK REVIEWS
Comput. Appl. Biosci. 1992 8: 418-419; doi:10.1093/bioinformatics/8.4.418 [Print PDF] [Request Permissions]  

BOOK REVIEW:

M.J. Barrow

BOOK REVIEWS
Comput. Appl. Biosci. 1992 8: 419; doi:10.1093/bioinformatics/8.4.419 [Print PDF] [Request Permissions]  

BOOK REVIEWS:

C. Mitchell and E. El-Mansi

BOOK REVIEWS
Comput. Appl. Biosci. 1992 8: 419-420; doi:10.1093/bioinformatics/8.4.419-a [Print PDF] [Request Permissions]  

BOOK REVIEW:

I. Thompson

BOOK REVIEWS
Comput. Appl. Biosci. 1992 8: 421-422; doi:10.1093/bioinformatics/8.4.421-a [Print PDF] [Request Permissions]  

SOFTWARE REVIEWS:

M. el Mansi

SOFTWARE REVIEWS
Comput. Appl. Biosci. 1992 8: 421; doi:10.1093/bioinformatics/8.4.421 [Print PDF] [Request Permissions]  

R. Henderson

SOFTWARE REVIEWS
Comput. Appl. Biosci. 1992 8: 422-423; doi:10.1093/bioinformatics/8.4.422 [Print PDF] [Request Permissions]  

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